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  • immunogenomics.io
  • 1
This site provides a view of some of the data from the Accelerating Medicines Partnership (AMP) Rheumatoid Arthritis (RA) Phase I project. Here, you can view single-cell RNA-seq, bulk RNA-seq, and mass cytometry data...
Relevance: 44.79664
  • www.omicsltd.com
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OmicsLtd offers advice and analytical support for DNA-seq, DNA methylation studies, ChIP-seq, ChIP-chip, RNA-seq and other high-throughput technologies, delivering the critical link between data generation at the laboratory bench and publication..
Relevance: 34.13725
  • bustools.github.io
BUS format is a file format for single-cell RNA-seq data designed to facilitate the development of modular workflows for data processing. It consists of a binary representation of barcode and UMI sequences from scRNA-seq reads, along with sets of..
Relevance: 33.630455
  • genomicscolab.ucsf.edu
We are excited to announce we now support multiple spatial transcriptomics approaches, including the 10x Genomics Visium and Xenium platforms... We provide collaborative resources to assist UCSF researchers in carrying out projects utilizing..
Relevance: 33.533688
  • www.fdaseqc.org
We are happy to post here the results, methods, data, scripts, and phalanx of papers for the Food and Drug Administration's (FDA) Sequencing Quality Control (SEQC) Study on RNA-Sequencing (RNA-Seq) and the Association of Biomolecular Resource..
Relevance: 33.196747
  • www.seq2fun.ca
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Seq2Fun is an ultrafast, all-in-one functional profiling tool for RNA-seq data analysis for organisms without reference genomes...
Relevance: 32.948677
  • www.fornaxbio.com
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We are proud to offer RNA related services such as RNA purification and enrichment, mRNA and CRISPR guide RNA synthesis... Our team started to generate NGS libraries since 2006. We have rich experiences in Genomic DNA-, Amplicon-, RNA-, small RNA-,..
Relevance: 32.60414
  • www.oculargeneexpression.com
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Our goal is to provide access to our well-curated set of expression data from human ocular tissues for both educational and research use. Over the past decades, we have been performing experiments to elucidate the biology of vision, and the..
Relevance: 32.138233
  • maayanlab.cloud
With BioJupies you can produce in seconds a customized, reusable, and interactive report from your own raw or processed RNA-seq data through a simple user interface..
Relevance: 31.19038
  • www.omicsinformatics.com
  • 1
Our team now offers quick and comprehensive analysis of NGS data at an affordable cost. Whether it be RNA sequencing, ChIP-Seq, ChIP-exo or ATAC-Seq, reveal differences in gene expression and pathways to help you make insightful biological decisions...
Relevance: 31.06805
  • oncodb.org
OncoDB is an online database resource for researchers to explore abnormal patterns in gene expression as well as viral infection that are correlated to clinical features in cancer. Specifically, OncoDB integrated RNA-seq, DNA methylation, and related..
Relevance: 30.946844
  • zji90.github.io
  • 1
My primary research interest is developing novel statistical and computational methods for integrating and analyzing big and complex genomic data, especially data from single-cell sequencing and spatial transcriptomics. Some examples include the..
Relevance: 30.925648
  • www.guolianglab.org
  • 56
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Our main research interests are in the field of three-dimensional (3D) Genomics. We are using bioinformatics tools as well as statistical methods to analyze 3D genome structures and their functions from Chromatin Interaction Analysis with Paired-End..
Relevance: 30.895967
  • www.altanalyze.org
AltAnalyze is an easy-to-use application for the end-to-end analysis of single-cell (ICGS/ cellHarmony) and bulk RNA-Seq data. For splicing sensitive platforms (single cell/bulk RNA-Seq or microarrays), AltAnalyze identities alternative splicing..
Relevance: 30.55945
  • cytotrace.stanford.edu
  • 1
CytoTRACE (Cellular (Cyto) Trajectory Reconstruction Analysis using gene Counts and Expression) is a computational method that predicts the differentiation state of cells from single-cell RNA-sequencing data. CytoTRACE leverages a simple, yet robust,..
Relevance: 30.478998
  • mccarrolllab.org
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Drop-seq is a technology we developed to enable biologists to analyze RNA expression genome-wide in thousands of individual cells at once. We first described this in a 2015 paper in Cell. Though commercial implementations of droplet-based single-cell..
Relevance: 30.397463
  • www.bioxenclue.com
  • 3
  • 1
BioXenClue is located in New Delhi Capital Region and a leading contract research service provider... BioXenClue Pvt Ltd is a service provider company on High throughput genomics, transcriptomics, metagenomics and proteomics. We offer services,..
Relevance: 30.320118
  • alzheimersworkbench.ucsd.edu
  • 1
  • 1
At present, we have R shiny app for RNA-seq analysis and we also provide a detailed protocol to do end-to-end analysis of RNA-seq datasets... Statistical Analysis Tools. We have developed tools for performing analysis of diverse data. Resources..
Relevance: 29.894556
  • fgrc.caltech.edu
The Functional Genomics Resource Center develops and disseminates experimental and computational methods for functional genomics. These include RNA transcript expression (RNA-seq) from traditional samples, small pools of cells and single cells,..
Relevance: 29.66749
  • acidgenomics.com
Toolkit for single-cell RNA-seq analysis that extends the functionality of SingleCellExperiment...
Relevance: 29.292322
  • www.data2biology.com
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We offer a wide array of bioinformatic services, including analysis of next-generation sequencing data (RNA-seq, small RNA, ChIP-seq, genome variants calling, de novo genome assembly and annotation) and many more... We are one of the driving forces..
Relevance: 29.047405
  • www.genosys-us.com
  • 3
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Genosys is dedicated to the research and development of visualization and automated analysis of high-throughput sequencing data. We develop Mendel Analytics, the world's first local sever based visualization and automated computational analysis..
Relevance: 28.833134
  • www.thechenglab.org
  • 1
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Biological processes are precisely regulated by TFs, miRNAs and other regulators. We aim to combine data from different sources, e.g, TF binding data (ChIP-seq and ChIP-chip), gene expression data (microarray and RNA-seq), with computational..
Relevance: 28.701359
  • genestomorrow.com
  • 2
We provide fast data analysis solutions for RNA-Seq data. We perform edgeR for differential expression analysis. We provide GSEA_analysis, PantherGO and many more features as requested by the researchers. We are with the clients until the..
Relevance: 28.460146
  • redcliffegenetics.com
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Redcliffe envisions creation of an integrated platform of leading researchers, scientists, doctors, and leading hospitals to ensure that we serve humankind in a holistic manner in the healthcare sector.Redcliffe's mission is to bring a revolution in..
Relevance: 28.117752
  • matrix.toulouse.inra.fr
Transcriptomic is a common tool to asses differential gene expression in order to compare multiple conditions... Most of the transcriptomic facilities offers a service for acquisition and statistical analysis of transcriptomic data (DNA chips, RNA-..
Relevance: 27.981037
  • www.muscledb.org
Most studies to-date have not addressed transcriptional diversity among skeletal muscles. MuscleDB is a project that uses unbiased RNA sequencing (RNA-seq) to profile global mRNA expression in a wide array of smooth, cardiac, and skeletal muscle..
Relevance: 27.821497
  • www.cengen.org
  • 5
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Our results from single-cell RNA-Seq are officially out in Cell (DOI: 10.1016/j.cell.2021.06.023). The data can be explored online with the updated CeNGEN app... We made some updates to the single-cell web app. It is available at the previous URL...
Relevance: 27.56932
  • www.rnaseqforthenextgeneration.org
NGS methods have dramatically decreased the cost of obtaining whole genome data on eukaryotic organisms, and data storage and analysis workflows are becoming freely available online. In particular, RNA-Seq can provide novel data on gene structure and..
Relevance: 27.477024
  • omnideconv.org
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The goal of omnideconv is to unify second generation cell-type deconvolution methods in an R package... The minimal installation installs only the dependencies required for the basic functionalities. All deconvolution methods need to be installed..
Relevance: 26.765282